Everything Seed Protein Bagels

Name: Everything Seed Protein Bagels
Prep time: 20 min
Cook time: 25 min
Total time: 45 min
Yield: 8 bagels
Ingredients: 1 cup warm water; 2 teaspoons active dry yeast; 1 tablespoon honey; 3 cups high-protein flour; 1/4 cup ground flaxseeds; 1 tablespoon sesame seeds; 1 tablespoon poppy seeds; 1 tablespoon sunflower seeds; 1 teaspoon salt; 1 egg (for egg wash); Flaky sea salt (for topping)

Highlighted under: Wholesome Treats

I absolutely love making Everything Seed Protein Bagels at home. The blend of sesame seeds, poppy seeds, and flaxseeds not only packs a punch of flavor, but also adds a fantastic nutritional boost. These bagels are perfect for a protein-packed breakfast or a satisfying snack. Baking them fresh fills the kitchen with an irresistible aroma, and they really hit the spot when topped with cream cheese or avocado. I can’t wait to share this recipe with you, as it’s become a favorite in my household.

Created by

Chantel Rivers

Last updated on 2026-02-16T01:01:35.997Z

When I decided to make Everything Seed Protein Bagels, I was amazed at how simple it was to create something so delicious and healthy. I experimented with different seeds and discovered that the combination of flaky sea salt and the nutty flavor of each seed really brings the bagels to life. The texture is also key, with a nice chewiness that makes them satisfying to eat.

One of my favorite tips is to toast the bagels before serving. It adds an extra layer of flavor and crunch that elevates the experience. Pair them with your favorite spread, and you've got a quick meal that feels gourmet. You'll love how versatile these bagels are!

Why You Will Love These Bagels
Packed with protein to keep you full longer
Nutty flavors from a variety of seeds
Great texture with a perfect chewy crust

The Importance of Protein in Your Bagels

These Everything Seed Protein Bagels are loaded with protein, thanks to the use of high-protein flour and ground flaxseeds. Protein is crucial for muscle repair and maintenance, making these bagels an excellent choice for athletes or anyone looking to stay satisfied longer. Each bagel provides a hearty dose, perfect for powering through your morning or as a post-workout snack.

The inclusion of flaxseeds not only boosts the protein content but also adds omega-3 fatty acids, promoting heart health. This recipe allows you to indulge in a comforting breakfast treat while still adhering to your nutritional goals. With a nutty taste and chewy texture, you won’t even realize you’re enjoying a protein-packed meal.

Mastering the Bagel Shape

Shaping your bagels is a key technique that can affect their final appearance and texture. When rolling the dough into balls, aim for a smooth surface to ensure even baking. Poking a hole in the center is essential for the classic bagel shape—this creates that iconic ring and allows for even cooking and boiling. If your hole seems too small, it may close up during boiling, leading to misshapen bagels.

It’s worth taking a moment to practice your shaping technique. Once you feel comfortable, you can even experiment with different sizes or shapes, such as mini bagels or larger ones for sandwiches. Just remember, a uniform size helps ensure that they cook evenly, preventing some from being undercooked while others are overdone.

Perfecting the Boiling Technique

Boiling bagels before baking is a crucial step in achieving that chewy crust that bagel lovers crave. Ensure the water is at a rapid boil before adding the bagels; this helps set the exterior quickly. Maintain the timing—boiling for just one minute per side ensures you develop a firm outer layer while keeping the interior soft and airy. If you boil for too long, you risk a dense texture rather than the desired lightness.

Adding a tablespoon of honey or malt syrup to the boiling water can enhance the bagel’s flavor and contribute to a beautiful golden color. If you find that your bagels begin to fall apart during boiling, try reducing the amount of water you incorporate into the dough or increasing the kneading time to develop more gluten strength.

Ingredients

Gather these ingredients to start making your delicious bagels.

Bagel Ingredients

1 cup warm water
2 teaspoons active dry yeast
1 tablespoon honey
3 cups high-protein flour
1/4 cup ground flaxseeds
1 tablespoon sesame seeds
1 tablespoon poppy seeds
1 tablespoon sunflower seeds
1 teaspoon salt
1 egg (for egg wash)
Flaky sea salt (for topping)

Make sure to measure your ingredients accurately for the best results.

Instructions

Follow these steps for perfectly baked bagels.

Prepare the Dough

In a bowl, combine warm water, yeast, and honey. Let it sit for about 5 minutes until frothy. In a separate bowl, mix the flour, ground flaxseeds, sesame seeds, poppy seeds, sunflower seeds, and salt. Pour the yeast mixture into the dry ingredients and mix until a dough forms.

Knead and Rise

Knead the dough on a floured surface for about 8 minutes until smooth. Place it in a greased bowl, cover it with a towel, and let it rise in a warm place for about 30 minutes or until doubled in size.

Shape the Bagels

Once the dough has risen, punch it down and divide it into 8 equal pieces. Roll each piece into a ball and then poke a hole in the center to form the bagel shape. Place them on a baking sheet lined with parchment paper.

Boil and Bake

Preheat your oven to 425°F (220°C). Bring a large pot of water to a boil. Gently drop the bagels in (two at a time) and boil for 1 minute on each side. Remove and place back on the baking sheet, then brush with beaten egg and sprinkle flaky sea salt on top.

Finish Baking

Bake in the preheated oven for 25 minutes until golden brown. Allow to cool slightly before serving. Enjoy your delicious homemade bagels!

Enjoy these bagels fresh or toast them for an even better flavor!

Pro Tips

Feel free to customize the seeds and toppings according to your preference. Try adding some dried herbs or spices for extra flavor.

Storage and Reheating Tips

Once your Everything Seed Protein Bagels have cooled, make sure to store them properly to retain their freshness. Place the bagels in an airtight container at room temperature for up to two days. For longer storage, consider freezing the bagels. Wrap each one tightly in plastic wrap and then place them in a freezer bag. They can be frozen for up to three months.

When you're ready to enjoy a frozen bagel, simply remove it from the freezer and allow it to thaw at room temperature, or warm it in a toaster or oven at 350°F (175°C) for about 10 minutes. This ensures they regain their delightful texture, making your homemade bagels taste fresh out of the oven.

Serving Suggestions

These bagels are incredibly versatile and can be enjoyed in numerous ways beyond the classic cream cheese and lox. Try slicing them and topping with avocado and a sprinkle of chili flakes for a nutritious brunch option. They also pair wonderfully with nut butters and sliced bananas, offering a perfect post-workout meal.

You can even get creative by making mini sandwiches using the bagels as the base. Stuff them with your favorite deli meats, cheeses, or roasted vegetables for a quick lunch option. The nutty flavor of the seeds complements a wide range of toppings, providing endless possibilities to suit your palate.

Questions About Recipes

→ Can I freeze the bagels?

Yes, these bagels freeze well. Just make sure to wrap them tightly in plastic wrap and place them in a freezer bag.

→ What can I use instead of honey?

You can substitute honey with maple syrup or agave nectar for a vegan option.

→ How do I store leftover bagels?

Store them in an airtight container at room temperature for up to 3 days, or refrigerate for a week.

→ Can I use all-purpose flour instead of high-protein flour?

While you can use all-purpose flour, the bagels may not be as chewy and protein-rich as using high-protein flour.